ANGSD: Analysis of next generation Sequencing Data

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  1. Temp‏‎ (20:47, 29 May 2012)
  2. Li2010‏‎ (20:40, 14 June 2012)
  3. Majorminor‏‎ (20:41, 14 June 2012)
  4. Covariance matrix for PCA‏‎ (15:19, 18 June 2012)
  5. Inbreed‏‎ (15:27, 18 June 2012)
  6. SNP Calling‏‎ (11:34, 19 June 2012)
  7. Example of cases control phenotype file‏‎ (09:09, 21 June 2012)
  8. Example of a quantitative phenotype file‏‎ (09:10, 21 June 2012)
  9. Example of a covariance file‏‎ (09:10, 21 June 2012)
  10. Example of a covariate file‏‎ (09:11, 21 June 2012)
  11. Regionfile‏‎ (14:37, 29 June 2012)
  12. Skotte‏‎ (12:28, 24 September 2012)
  13. SoapSNP‏‎ (12:32, 24 September 2012)
  14. Introduction‏‎ (18:13, 23 October 2012)
  15. Glf files‏‎ (12:00, 24 October 2012)
  16. Memory Usage‏‎ (02:32, 18 December 2012)
  17. Error estimation method‏‎ (16:53, 12 February 2013)
  18. Authors‏‎ (12:50, 28 June 2013)
  19. Kim2011‏‎ (13:54, 28 June 2013)
  20. Skotte2012‏‎ (10:27, 29 June 2013)
  21. Nielsen2012‏‎ (10:31, 29 June 2013)
  22. Li2011‏‎ (10:38, 29 June 2013)
  23. Gatk‏‎ (10:43, 29 June 2013)
  24. Base quality‏‎ (08:17, 30 September 2013)
  25. Korneliussen2013‏‎ (14:03, 3 October 2013)
  26. Angsd structure‏‎ (19:03, 4 December 2013)
  27. Changes‏‎ (18:02, 17 December 2013)
  28. Depth‏‎ (12:16, 3 January 2014)
  29. Tutorial‏‎ (00:31, 10 January 2014)
  30. MajorMinor Method‏‎ (14:15, 26 February 2014)
  31. ErrorSykMethod‏‎ (16:12, 26 February 2014)
  32. ErrorPerfect‏‎ (16:15, 26 February 2014)
  33. PostFreq‏‎ (16:44, 26 February 2014)
  34. Orlando2013‏‎ (13:32, 27 June 2014)
  35. Rasmussen2011‏‎ (13:35, 27 June 2014)
  36. RealSFSmethod‏‎ (12:23, 30 June 2014)
  37. Misc example‏‎ (10:55, 31 July 2014)
  38. SYKmaf‏‎ (18:50, 15 December 2014)
  39. Bugs‏‎ (16:05, 26 February 2015)
  40. Mismatch‏‎ (12:17, 27 March 2015)
  41. Vcf‏‎ (16:00, 27 April 2015)
  42. NgsRelate‏‎ (09:23, 20 June 2015)
  43. Contamination‏‎ (14:51, 11 July 2015)
  44. Fst PCA‏‎ (15:21, 30 July 2015)
  45. Fst correctness‏‎ (15:27, 30 July 2015)
  46. Citing angsd‏‎ (09:08, 31 August 2015)
  47. Pbs‏‎ (17:38, 8 October 2015)
  48. Sites‏‎ (15:00, 16 November 2015)
  49. Major Minor‏‎ (13:56, 4 December 2015)
  50. Quick Start‏‎ (13:58, 4 December 2015)

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