ANGSD: Analysis of next generation Sequencing Data
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Internal error
[48cb1f68b42bc47f0892b4d4] /angsd/index.php/Inbreed Error: Cannot access private property Parser::$mStripState
Backtrace:
from /kellyData/home/software/angsd/angsdWiki2023/extensions/SyntaxHighlight_GeSHi/SyntaxHighlight_GeSHi.class.php(112)
#0 /kellyData/home/software/angsd/angsdWiki2023/includes/parser/Parser.php(3996): SyntaxHighlight_GeSHi::parserHook()
#1 /kellyData/home/software/angsd/angsdWiki2023/includes/parser/PPFrame_Hash.php(355): Parser->extensionSubstitution()
#2 /kellyData/home/software/angsd/angsdWiki2023/includes/parser/Parser.php(2937): PPFrame_Hash->expand()
#3 /kellyData/home/software/angsd/angsdWiki2023/includes/parser/Parser.php(1588): Parser->replaceVariables()
#4 /kellyData/home/software/angsd/angsdWiki2023/includes/parser/Parser.php(700): Parser->internalParse()
#5 /kellyData/home/software/angsd/angsdWiki2023/includes/content/WikitextContentHandler.php(346): Parser->parse()
#6 /kellyData/home/software/angsd/angsdWiki2023/includes/content/ContentHandler.php(1748): WikitextContentHandler->fillParserOutput()
#7 /kellyData/home/software/angsd/angsdWiki2023/includes/content/Renderer/ContentRenderer.php(47): ContentHandler->getParserOutput()
#8 /kellyData/home/software/angsd/angsdWiki2023/includes/Revision/RenderedRevision.php(260): MediaWiki\Content\Renderer\ContentRenderer->getParserOutput()
#9 /kellyData/home/software/angsd/angsdWiki2023/includes/Revision/RenderedRevision.php(232): MediaWiki\Revision\RenderedRevision->getSlotParserOutputUncached()
#10 /kellyData/home/software/angsd/angsdWiki2023/includes/Revision/RevisionRenderer.php(227): MediaWiki\Revision\RenderedRevision->getSlotParserOutput()
#11 /kellyData/home/software/angsd/angsdWiki2023/includes/Revision/RevisionRenderer.php(164): MediaWiki\Revision\RevisionRenderer->combineSlotOutput()
#12 [internal function]: MediaWiki\Revision\RevisionRenderer->MediaWiki\Revision\{closure}()
#13 /kellyData/home/software/angsd/angsdWiki2023/includes/Revision/RenderedRevision.php(199): call_user_func()
#14 /kellyData/home/software/angsd/angsdWiki2023/includes/poolcounter/PoolWorkArticleView.php(87): MediaWiki\Revision\RenderedRevision->getRevisionParserOutput()
#15 /kellyData/home/software/angsd/angsdWiki2023/includes/poolcounter/PoolWorkArticleViewCurrent.php(92): PoolWorkArticleView->renderRevision()
#16 /kellyData/home/software/angsd/angsdWiki2023/includes/poolcounter/PoolCounterWork.php(166): PoolWorkArticleViewCurrent->doWork()
#17 /kellyData/home/software/angsd/angsdWiki2023/includes/page/ParserOutputAccess.php(299): PoolCounterWork->execute()
#18 /kellyData/home/software/angsd/angsdWiki2023/includes/page/Article.php(735): MediaWiki\Page\ParserOutputAccess->getParserOutput()
#19 /kellyData/home/software/angsd/angsdWiki2023/includes/page/Article.php(545): Article->generateContentOutput()
#20 /kellyData/home/software/angsd/angsdWiki2023/includes/actions/ViewAction.php(78): Article->view()
#21 /kellyData/home/software/angsd/angsdWiki2023/includes/MediaWiki.php(556): ViewAction->show()
#22 /kellyData/home/software/angsd/angsdWiki2023/includes/MediaWiki.php(333): MediaWiki->performAction()
#23 /kellyData/home/software/angsd/angsdWiki2023/includes/MediaWiki.php(923): MediaWiki->performRequest()
#24 /kellyData/home/software/angsd/angsdWiki2023/includes/MediaWiki.php(576): MediaWiki->main()
#25 /kellyData/home/software/angsd/angsdWiki2023/index.php(50): MediaWiki->run()
#26 /kellyData/home/software/angsd/angsdWiki2023/index.php(46): wfIndexMain()
#27 {main}