ANGSD: Analysis of next generation Sequencing Data

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  1. (hist) ‎Association ‎[22,677 bytes]
  2. (hist) ‎Input ‎[18,349 bytes]
  3. (hist) ‎Thetas,Tajima,Neutrality tests ‎[15,776 bytes]
  4. (hist) ‎SFS Estimation ‎[12,448 bytes]
  5. (hist) ‎Genotype Distribution ‎[12,401 bytes]
  6. (hist) ‎Change log ‎[12,285 bytes]
  7. (hist) ‎Abbababa2 ‎[11,774 bytes]
  8. (hist) ‎PCA MDS ‎[11,666 bytes]
  9. (hist) ‎Genotype Likelihoods ‎[10,127 bytes]
  10. (hist) ‎Safv3 ‎[9,903 bytes]
  11. (hist) ‎Error estimation ‎[9,758 bytes]
  12. (hist) ‎Vcf ‎[8,478 bytes]
  13. (hist) ‎Quick Start ‎[8,179 bytes]
  14. (hist) ‎Abbababa ‎[7,210 bytes]
  15. (hist) ‎Allele Counts ‎[7,191 bytes]
  16. (hist) ‎Fst correctness ‎[6,807 bytes]
  17. (hist) ‎Fst ‎[6,145 bytes]
  18. (hist) ‎Allele Frequencies ‎[6,039 bytes]
  19. (hist) ‎Contamination ‎[5,910 bytes]
  20. (hist) ‎SnpFilters ‎[5,331 bytes]
  21. (hist) ‎RealSFS ‎[5,257 bytes]
  22. (hist) ‎Genotype likelihoods from alignments new ‎[5,114 bytes]
  23. (hist) ‎Filters ‎[5,114 bytes]
  24. (hist) ‎MsToGlf ‎[5,033 bytes]
  25. (hist) ‎Relatedness ‎[4,791 bytes]
  26. (hist) ‎Genotype calling ‎[4,526 bytes]
  27. (hist) ‎Fasta ‎[3,975 bytes]
  28. (hist) ‎Sites ‎[3,890 bytes]
  29. (hist) ‎Inbreed ‎[3,624 bytes]
  30. (hist) ‎Plink ‎[3,600 bytes]
  31. (hist) ‎Glcomparison ‎[3,393 bytes]
  32. (hist) ‎HWE test ‎[3,350 bytes]
  33. (hist) ‎Depth ‎[2,903 bytes]
  34. (hist) ‎Major Minor ‎[2,637 bytes]
  35. (hist) ‎Beagle input ‎[2,524 bytes]
  36. (hist) ‎Haploid calling ‎[2,512 bytes]
  37. (hist) ‎SNP calling ‎[2,350 bytes]
  38. (hist) ‎Korneliussen2013 ‎[2,280 bytes]
  39. (hist) ‎ANGSD ‎[2,274 bytes]
  40. (hist) ‎ErrorPerfect ‎[2,063 bytes]
  41. (hist) ‎RealSFSmethod ‎[2,062 bytes]
  42. (hist) ‎Citing angsd ‎[1,940 bytes]
  43. (hist) ‎PCA ‎[1,876 bytes]
  44. (hist) ‎Heterozygosity ‎[1,845 bytes]
  45. (hist) ‎Angsd structure ‎[1,737 bytes]
  46. (hist) ‎2d SFS Estimation ‎[1,726 bytes]
  47. (hist) ‎Misc example ‎[1,599 bytes]
  48. (hist) ‎ThetaStat ‎[1,503 bytes]
  49. (hist) ‎Error estimation method ‎[1,469 bytes]
  50. (hist) ‎Installation ‎[1,435 bytes]

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