ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Albrecht
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5 April 2015
- 18:5218:52, 5 April 2015 diff hist +318 Genotype calling →options
15 December 2014
- 18:5018:50, 15 December 2014 diff hist −8 SYKmaf Undo revision 2344 by Albrecht (talk) current
- 18:4918:49, 15 December 2014 diff hist +8 SYKmaf →ML estimator with unknown minor
25 August 2014
- 12:5812:58, 25 August 2014 diff hist −566 Association →Output
- 12:5612:56, 25 August 2014 diff hist +228 Association →Score statistic
- 12:4912:49, 25 August 2014 diff hist +201 Change log →Latest
27 June 2014
- 13:3513:35, 27 June 2014 diff hist −1,005 Contamination →method
- 13:3513:35, 27 June 2014 diff hist +1,005 N Rasmussen2011 Created page with "[http://www.ncbi.nlm.nih.gov/entrez?Db=pubmed&Cmd=ShowDetailView&uid=21940856 PMID 21940856], [http://www.bioinformatics.org/texmed/cgi-bin/list.cgi?PMID=21940856 bibtex ] Ras..." current
- 13:3413:34, 27 June 2014 diff hist +59 Citing angsd No edit summary
- 13:3213:32, 27 June 2014 diff hist +174 Orlando2013 No edit summary current
- 13:2913:29, 27 June 2014 diff hist +1,084 Contamination No edit summary
- 13:0613:06, 27 June 2014 diff hist +35 Contamination No edit summary
- 12:5912:59, 27 June 2014 diff hist +401 Contamination →Output
26 June 2014
- 12:2212:22, 26 June 2014 diff hist +14 Thetas,Tajima,Neutrality tests →Example
- 12:1812:18, 26 June 2014 diff hist −65 Thetas,Tajima,Neutrality tests →Example
- 12:1612:16, 26 June 2014 diff hist +203 Thetas,Tajima,Neutrality tests →Example
- 11:4511:45, 26 June 2014 diff hist +131 Major Minor No edit summary
- 11:4211:42, 26 June 2014 diff hist +53 Major Minor →Pre specified Major using a reference
- 11:4111:41, 26 June 2014 diff hist −1 Major Minor →Pre specified Major using a reference
- 11:3411:34, 26 June 2014 diff hist −34 User:Albrecht Blanked the page current
24 June 2014
- 11:4611:46, 24 June 2014 diff hist +3 Input →Brief Overview
13 May 2014
- 16:1516:15, 13 May 2014 diff hist +556 Genotype Likelihoods →Output
23 April 2014
- 15:1915:19, 23 April 2014 diff hist +190 Major Minor No edit summary
- 15:1615:16, 23 April 2014 diff hist −111 MediaWiki:Sitenotice No edit summary
- 15:1515:15, 23 April 2014 diff hist +12 ANGSD No edit summary
6 March 2014
- 12:2612:26, 6 March 2014 diff hist −8 SFS Estimation →How to plot
- 12:2512:25, 6 March 2014 diff hist −6 SFS Estimation →How to plot
- 12:2512:25, 6 March 2014 diff hist −19 SFS Estimation →Format specification of binary .saf file
- 12:2112:21, 6 March 2014 diff hist −56 SFS Estimation →Folded spectra
- 12:1612:16, 6 March 2014 diff hist +49 SFS Estimation →Interpretation of the emOptim2 output file
- 12:1512:15, 6 March 2014 diff hist +347 SFS Estimation →Options
- 11:2711:27, 6 March 2014 diff hist +148 SFS Estimation →Options
- 11:2611:26, 6 March 2014 diff hist +52 SFS Estimation →Posterior per-site distributions of the sample allele frequency
- 11:2311:23, 6 March 2014 diff hist +13 SFS Estimation →Interpretation of output file
- 11:2311:23, 6 March 2014 diff hist +47 SFS Estimation →Interpretation of output file
- 11:2011:20, 6 March 2014 diff hist −3 SFS Estimation →Example
- 11:2011:20, 6 March 2014 diff hist +155 SFS Estimation →Example
- 11:1811:18, 6 March 2014 diff hist +188 SFS Estimation →Brief Overview
- 11:1711:17, 6 March 2014 diff hist −64 SFS Estimation →Example
- 11:1611:16, 6 March 2014 diff hist +98 SFS Estimation →Example
- 11:1511:15, 6 March 2014 diff hist −1 SFS Estimation →Example
- 11:1111:11, 6 March 2014 diff hist +1 SFS Estimation →How to plot
- 11:1011:10, 6 March 2014 diff hist +43 SFS Estimation →How to plot
- 11:0911:09, 6 March 2014 diff hist −2,070 SFS Estimation →Theory
- 11:0911:09, 6 March 2014 diff hist −11 RealSFSmethod →Theory
- 11:0811:08, 6 March 2014 diff hist +2,068 N RealSFSmethod Created page with "=Theory= <pre> We will try to elaborate on the theory behind the methods. Below is only a preliminary version of the theory. </pre> This method is described in Nielsen2012..."
- 11:0811:08, 6 March 2014 diff hist +6 SFS Estimation No edit summary
- 11:0811:08, 6 March 2014 diff hist +2 SFS Estimation No edit summary
- 11:0811:08, 6 March 2014 diff hist +64 SFS Estimation No edit summary
- 11:0611:06, 6 March 2014 diff hist +161 SFS Estimation →Options