ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Albrecht
		
		
		
		
		
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24 October 2023
- 10:0510:05, 24 October 2023 diff hist +23 N Test  Created page with "# hello a sdf a fa sdfa" current
 
6 February 2023
- 17:4517:45, 6 February 2023 diff hist +1 Fasta  →Ancestral fasta using multiple outgroup current
 - 17:4517:45, 6 February 2023 diff hist +24 Fasta  →Ancestral fasta
 - 17:4417:44, 6 February 2023 diff hist +49 Fasta  →Options
 - 17:4317:43, 6 February 2023 diff hist +213 Fasta  →Ancestral fasta
 - 17:4117:41, 6 February 2023 diff hist +807 Fasta  →Ancestral fasta
 - 17:3217:32, 6 February 2023 diff hist +674 Fasta No edit summary
 - 17:2217:22, 6 February 2023 diff hist +26 Allele Frequencies  →Brief Overview
 
28 September 2021
- 10:0010:00, 28 September 2021 diff hist 0 Allele Frequencies No edit summary
 - 09:5909:59, 28 September 2021 diff hist −4 SNP calling No edit summary current
 - 09:5709:57, 28 September 2021 diff hist 0 Genotype likelihoods from alignments new No edit summary current
 - 09:5709:57, 28 September 2021 diff hist 0 Input No edit summary current
 - 09:5609:56, 28 September 2021 diff hist 0 Genotype Likelihoods No edit summary current
 
20 April 2020
- 16:2616:26, 20 April 2020 diff hist +62 PCA MDS  →Options current
 
29 August 2019
- 08:2108:21, 29 August 2019 diff hist +113 Relatedness No edit summary current
 
17 July 2019
- 09:5709:57, 17 July 2019 diff hist −1 LD No edit summary current
 - 09:5709:57, 17 July 2019 diff hist +106 N LD  Created page with " For estimation of LD based on genotype likelihoods you can use [(https://github.com/fgvieira/ngsLD ngsLD]"
 - 09:5409:54, 17 July 2019 diff hist +35 MediaWiki:Sidebar No edit summary current
 
4 October 2018
- 08:3708:37, 4 October 2018 diff hist +2 PCA MDS  Undo revision 3053 by Albrecht (talk)
 - 08:3608:36, 4 October 2018 diff hist −2 PCA MDS  →Model
 - 08:3508:35, 4 October 2018 diff hist +1 PCA MDS  →sampled bases *ibs.gz
 - 08:3108:31, 4 October 2018 diff hist +4 PCA MDS  →sampled bases *ibs.gz
 
18 May 2018
- 13:1413:14, 18 May 2018 diff hist +69 Genotype Likelihoods  →SYK (Kim et al.)
 
30 April 2018
- 12:3712:37, 30 April 2018 diff hist +27 N Dodepth  Redirected page to Allele Counts current
 - 12:3612:36, 30 April 2018 diff hist +27 N Docounts  Redirected page to Allele Counts current
 
2 April 2018
- 11:0211:02, 2 April 2018 diff hist +28 N Docount  Redirected page to Allele Counts current
 - 11:0111:01, 2 April 2018 diff hist +30 N Dogeno  Redirected page to Genotype calling current
 - 11:0011:00, 2 April 2018 diff hist +25 N Domajorminor  Redirected page to Major Minor current
 - 10:5910:59, 2 April 2018 diff hist +32 N Rmtriallelic  Redirected page to Allele Frequencies current
 - 10:5810:58, 2 April 2018 diff hist +32 N Snp pval  Redirected page to Allele Frequencies current
 - 10:5710:57, 2 April 2018 diff hist +32 N Dopost  Redirected page to Allele Frequencies current
 - 10:5610:56, 2 April 2018 diff hist +32 N Domaf  Redirected page to Allele Frequencies current
 - 10:5310:53, 2 April 2018 diff hist +71 Allele Frequencies No edit summary
 - 10:5210:52, 2 April 2018 diff hist −3 MediaWiki:Common.css No edit summary current
 - 10:5010:50, 2 April 2018 diff hist +3 MediaWiki:Common.css No edit summary
 - 10:4910:49, 2 April 2018 diff hist +54 Allele Frequencies No edit summary
 - 10:4810:48, 2 April 2018 diff hist +82 N MediaWiki:Common.css  Created page with "→CSS placed here will be applied to all skins: .keywords { display: none; }"
 
12 March 2018
- 16:3916:39, 12 March 2018 diff hist +471 PCA MDS No edit summary
 
7 February 2018
- 15:5915:59, 7 February 2018 diff hist −1 HWE and Inbreeding estimates  →Site estimate of inbreeding coefficient (HWE test) current
 - 15:5815:58, 7 February 2018 diff hist −24 MediaWiki:Sidebar No edit summary
 - 15:5615:56, 7 February 2018 diff hist +65 PCA  →single read sampling current
 - 15:5515:55, 7 February 2018 diff hist +20 PCA  →NGS tools
 - 15:5415:54, 7 February 2018 diff hist +729 PCA No edit summary
 - 15:5415:54, 7 February 2018 diff hist 0 N File:Pcangsd pca.png No edit summary current
 - 15:4415:44, 7 February 2018 diff hist +303 NGSadmix No edit summary current
 - 15:1515:15, 7 February 2018 diff hist +112 NGSadmix No edit summary
 - 15:1515:15, 7 February 2018 diff hist 0 N File:AdmixtureNGS.png No edit summary current
 
19 January 2018
- 13:5913:59, 19 January 2018 diff hist +1 Genotype calling  →Options
 - 13:5813:58, 19 January 2018 diff hist +95 Genotype calling  →Options
 
10 August 2017
- 09:3209:32, 10 August 2017 diff hist +18 Association  →Output