ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Albrecht
Jump to navigation
Jump to search
27 April 2016
- 16:0716:07, 27 April 2016 diff hist +4 PCA MDS →MDS/PCA using R
- 16:0716:07, 27 April 2016 diff hist 0 N File:IBD PCA.pdf No edit summary
- 16:0616:06, 27 April 2016 diff hist +18 PCA MDS →MDS/PCA using R
- 16:0316:03, 27 April 2016 diff hist +406 PCA MDS No edit summary
- 16:0116:01, 27 April 2016 diff hist +54 PCA MDS →Model
- 15:4815:48, 27 April 2016 diff hist +1,455 PCA MDS →Output
- 15:4515:45, 27 April 2016 diff hist −160 PCA MDS →samples base *ibsMat
- 15:4415:44, 27 April 2016 diff hist +1,454 PCA MDS →Output
- 15:4315:43, 27 April 2016 diff hist +96 PCA MDS →Output
- 15:4215:42, 27 April 2016 diff hist −272 PCA MDS →Output
- 15:4115:41, 27 April 2016 diff hist +2,921 PCA MDS →Output
- 15:3415:34, 27 April 2016 diff hist −87 PCA MDS No edit summary
- 15:3315:33, 27 April 2016 diff hist +18 PCA MDS →Options
- 15:3215:32, 27 April 2016 diff hist +175 PCA MDS →Options
- 11:4711:47, 27 April 2016 diff hist +4,143 PCA MDS →single read sampling approach for PCA or MDS
- 11:2411:24, 27 April 2016 diff hist +143 PCA MDS No edit summary
- 11:2311:23, 27 April 2016 diff hist 0 PCA No edit summary
- 11:2211:22, 27 April 2016 diff hist +632 PCA No edit summary
- 11:2211:22, 27 April 2016 diff hist +48 N PCA MDS Created page with "= single read sampling approach for PCA or MDS ="
- 11:1211:12, 27 April 2016 diff hist +62 MediaWiki:Sidebar No edit summary
10 April 2016
- 17:0217:02, 10 April 2016 diff hist +8 HWE test No edit summary
- 16:5916:59, 10 April 2016 diff hist +207 HWE test No edit summary
- 16:4816:48, 10 April 2016 diff hist +2 HWE and Inbreeding estimates →Site estimate of inbreeding coefficient (HWE test)
- 16:2616:26, 10 April 2016 diff hist +5 HWE test No edit summary
- 16:2616:26, 10 April 2016 diff hist +184 HWE test →Use as a filter
- 16:1616:16, 10 April 2016 diff hist +567 HWE test No edit summary
- 16:0616:06, 10 April 2016 diff hist 0 HWE and Inbreeding estimates →Site estimate of inbreeding coefficient (HWE test)
- 16:0516:05, 10 April 2016 diff hist 0 HWE test →Output
- 16:0416:04, 10 April 2016 diff hist +7 HWE test →Output
- 16:0416:04, 10 April 2016 diff hist +439 HWE test →Output
- 16:0016:00, 10 April 2016 diff hist +1,847 N HWE test Created page with "Test for Hardy Weinberg equilibrium based on genotype likelihoods. This class works both as a filter for all other classes and outputs the results in a file. If you want to ..."
- 15:4515:45, 10 April 2016 diff hist +32 MediaWiki:Sidebar No edit summary
14 March 2016
- 09:3309:33, 14 March 2016 diff hist 0 Haploid calling →Output
- 09:3309:33, 14 March 2016 diff hist +168 Haploid calling →Output
13 March 2016
- 12:3412:34, 13 March 2016 diff hist +2 Haploid calling No edit summary
- 12:3312:33, 13 March 2016 diff hist 0 Haploid calling No edit summary
11 March 2016
- 10:4610:46, 11 March 2016 diff hist +2,758 Abbababa No edit summary current
8 March 2016
- 11:1211:12, 8 March 2016 diff hist −71 Association →Case control association using allele frequencies
15 February 2016
- 10:2110:21, 15 February 2016 diff hist +81 Abbababa No edit summary
8 February 2016
- 16:2416:24, 8 February 2016 diff hist +125 Fasta →EBD
- 16:1916:19, 8 February 2016 diff hist −2 Fasta →EBD
- 16:1916:19, 8 February 2016 diff hist −143 Fasta No edit summary
- 16:1816:18, 8 February 2016 diff hist +3 Fasta No edit summary
- 16:1716:17, 8 February 2016 diff hist +2 Fasta →Brief Overview
- 16:1516:15, 8 February 2016 diff hist +131 Fasta →Brief Overview
- 15:4015:40, 8 February 2016 diff hist +246 Fasta →Options
28 January 2016
- 10:1710:17, 28 January 2016 diff hist +115 Haploid calling No edit summary
22 January 2016
- 13:3513:35, 22 January 2016 diff hist +3 Abbababa →Options
- 13:3513:35, 22 January 2016 diff hist +346 Abbababa No edit summary
- 11:0111:01, 22 January 2016 diff hist +54 Abbababa →Example