ANGSD: Analysis of next generation Sequencing Data

Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.

SFS Estimation

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Revision as of 15:13, 18 June 2012 by Albrecht (talk | contribs) (Created page with "==realSFS== From version 0.20 we can now estimate the joint likelihood of being in frequency j. From version 0.24 the tajima is being estimated -realSFS 1 an sfs file will ...")
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realSFS

From version 0.20 we can now estimate the joint likelihood of being in frequency j. From version 0.24 the tajima is being estimated

-realSFS 1 an sfs file will be generated.

-realSFS 2 the tajima will be printed to standard output

-realSFS 4 snpcalling (not implemented)

-realSFS 8 genotypecalling (not implemented)

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