ANGSD: Analysis of next generation Sequencing Data

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Nielsen2012

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Rasmus Nielsen, Thorfinn Korneliussen, Anders Albrechtsen, Yingrui Li1, Jun Wang, SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data. PLOS ONE

Bibtex

@Article{pmid22911679,
   Author="Nielsen, R.  and Korneliussen, T.  and Albrechtsen, A.  and Li, Y.  and Wang, J. ",
   Title="{{S}{N}{P} calling, genotype calling, and sample allele frequency estimation from {N}ew-{G}eneration {S}equencing data}",
   Journal="PLoS ONE",
   Year="2012",
   Volume="7",
   Number="7",
   Pages="e37558"
}

doi

doi:10.1371/journal.pone.0037558