ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
Angsd structure
This page contains a short description of the overall structure of angsd.
It can be divided into
- Filereading
- Analysis
History
Angsd started back in 2009 as a simple program for estimating allele frequency, based on this we incrementally added new functionality. A rough timeline can be found in the AUTHORS file in the program bundle