ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Albrecht
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10 April 2016
- 16:0016:00, 10 April 2016 diff hist +1,847 N HWE test Created page with "Test for Hardy Weinberg equilibrium based on genotype likelihoods. This class works both as a filter for all other classes and outputs the results in a file. If you want to ..."
- 15:4515:45, 10 April 2016 diff hist +32 MediaWiki:Sidebar No edit summary
14 March 2016
- 09:3309:33, 14 March 2016 diff hist 0 Haploid calling →Output
- 09:3309:33, 14 March 2016 diff hist +168 Haploid calling →Output
13 March 2016
- 12:3412:34, 13 March 2016 diff hist +2 Haploid calling No edit summary
- 12:3312:33, 13 March 2016 diff hist 0 Haploid calling No edit summary
11 March 2016
- 10:4610:46, 11 March 2016 diff hist +2,758 Abbababa No edit summary current
8 March 2016
- 11:1211:12, 8 March 2016 diff hist −71 Association →Case control association using allele frequencies
15 February 2016
- 10:2110:21, 15 February 2016 diff hist +81 Abbababa No edit summary
8 February 2016
- 16:2416:24, 8 February 2016 diff hist +125 Fasta →EBD
- 16:1916:19, 8 February 2016 diff hist −2 Fasta →EBD
- 16:1916:19, 8 February 2016 diff hist −143 Fasta No edit summary
- 16:1816:18, 8 February 2016 diff hist +3 Fasta No edit summary
- 16:1716:17, 8 February 2016 diff hist +2 Fasta →Brief Overview
- 16:1516:15, 8 February 2016 diff hist +131 Fasta →Brief Overview
- 15:4015:40, 8 February 2016 diff hist +246 Fasta →Options
28 January 2016
- 10:1710:17, 28 January 2016 diff hist +115 Haploid calling No edit summary
22 January 2016
- 13:3513:35, 22 January 2016 diff hist +3 Abbababa →Options
- 13:3513:35, 22 January 2016 diff hist +346 Abbababa No edit summary
- 11:0111:01, 22 January 2016 diff hist +54 Abbababa →Example
- 10:4710:47, 22 January 2016 diff hist +27 Plink →NB
- 10:4610:46, 22 January 2016 diff hist −1 Plink →Example
- 10:4410:44, 22 January 2016 diff hist +10 Genotype calling →Example
3 January 2016
- 18:2418:24, 3 January 2016 diff hist +3 MediaWiki:Sidebar No edit summary
- 18:2118:21, 3 January 2016 diff hist +6 MediaWiki:Sidebar No edit summary
- 15:2815:28, 3 January 2016 diff hist −32 Haploid calling →Output
- 15:2715:27, 3 January 2016 diff hist +2,256 N Haploid calling Created page with "Simple haploid output based on sampling or consensus. __TOC__ <classdiagram type="dir:LR"> [BAM files{bg:orange}]->[Sequence data|Random base;Consensus base] [sequence da..."
- 15:1515:15, 3 January 2016 diff hist +35 MediaWiki:Sidebar No edit summary
16 December 2015
- 16:3016:30, 16 December 2015 diff hist +59 MsToGlf No edit summary
4 December 2015
- 16:1116:11, 4 December 2015 diff hist −1 Filters →Extra
- 16:1116:11, 4 December 2015 diff hist −98 Filters →Extra
- 15:2315:23, 4 December 2015 diff hist +18 Input →Genotype Probability Files
- 15:2215:22, 4 December 2015 diff hist 0 Input →Tutorial
- 15:2215:22, 4 December 2015 diff hist +1,823 Input →-glf
- 15:1815:18, 4 December 2015 diff hist +790 Supersim No edit summary current
- 14:5514:55, 4 December 2015 diff hist −1 Input →Arguments
- 14:5514:55, 4 December 2015 diff hist 0 Input →Example
- 14:5414:54, 4 December 2015 diff hist 0 Input →Example
- 14:5414:54, 4 December 2015 diff hist 0 Input →Tutorial
- 14:5314:53, 4 December 2015 diff hist +4,725 Input →Genotype Probability Files
- 14:5214:52, 4 December 2015 diff hist −488 Input →VCF files
- 14:4614:46, 4 December 2015 diff hist +4,114 Input →VCF files
- 14:1714:17, 4 December 2015 diff hist −161 Input →Genotype Probability Files
- 14:1614:16, 4 December 2015 diff hist +29 Input No edit summary
- 14:1314:13, 4 December 2015 diff hist +788 Input →Genotype Probability Files
- 13:5613:56, 4 December 2015 diff hist +51 Input →Pileup files
- 13:5213:52, 4 December 2015 diff hist −5 Input →Tutorial
- 13:3313:33, 4 December 2015 diff hist +43 Input →Genotype Probability Files
- 13:2313:23, 4 December 2015 diff hist −12 Input No edit summary
- 13:2113:21, 4 December 2015 diff hist +11 Input No edit summary