ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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6 December 2013
- 14:4814:48, 6 December 2013 diff hist 0 File:Error1.png Thorfinn uploaded a new version of "File:Error1.png" current
- 14:4514:45, 6 December 2013 diff hist 0 File:Error1.png Thorfinn uploaded a new version of "File:Error1.png"
- 14:4014:40, 6 December 2013 diff hist −52 Error estimation →Output
- 14:4014:40, 6 December 2013 diff hist +53 Error estimation →Output
- 14:3714:37, 6 December 2013 diff hist +26 Error estimation →Output
- 14:3614:36, 6 December 2013 diff hist +26 Error estimation →Output
- 14:3514:35, 6 December 2013 diff hist 0 N File:Error2.png No edit summary
- 14:3514:35, 6 December 2013 diff hist 0 File:Error1.png Thorfinn uploaded a new version of "File:Error1.png"
- 14:3314:33, 6 December 2013 diff hist 0 N File:Error1.png No edit summary
- 14:2714:27, 6 December 2013 diff hist 0 N File:Error1.pdf No edit summary current
- 14:2114:21, 6 December 2013 diff hist +299 Error estimation →Output
- 13:5513:55, 6 December 2013 diff hist −20 Error estimation →extra options
- 13:5213:52, 6 December 2013 diff hist −4 Error estimation →Brief Overview
- 13:5013:50, 6 December 2013 diff hist +574 Error estimation →Error estimation from polymorphic sites
- 13:4013:40, 6 December 2013 diff hist +157 Error estimation No edit summary
- 11:5511:55, 6 December 2013 diff hist +1,470 Error estimation →Method 2
- 11:5411:54, 6 December 2013 diff hist +35 Error estimation →Output
- 11:5411:54, 6 December 2013 diff hist 0 Error estimation →output
- 11:5411:54, 6 December 2013 diff hist +10 Error estimation No edit summary
- 11:5211:52, 6 December 2013 diff hist +69 Error estimation No edit summary
- 11:3311:33, 6 December 2013 diff hist −1 Error estimation →output
- 10:5810:58, 6 December 2013 diff hist +203 Error estimation No edit summary
- 02:5702:57, 6 December 2013 diff hist +20 User:Thorfinn No edit summary
5 December 2013
- 20:2920:29, 5 December 2013 diff hist +38 User:Thorfinn No edit summary
- 19:0519:05, 5 December 2013 diff hist +12 User:Thorfinn No edit summary
- 19:0519:05, 5 December 2013 diff hist +916 N User:Thorfinn Created page with "Thorfinns angsd todolist 1) write error estimation on wiki, need more info 2) Rscript ../../angsd0.565/R/estError.R Loading required package: remix Loading required package..."
- 18:4318:43, 5 December 2013 diff hist +76 Error estimation No edit summary
4 December 2013
- 20:0320:03, 4 December 2013 diff hist −18 Angsd structure No edit summary current
- 19:5519:55, 4 December 2013 diff hist +517 Angsd structure →Analysis
- 19:5419:54, 4 December 2013 diff hist +13 Angsd structure →Input formats
- 19:5219:52, 4 December 2013 diff hist +2 Angsd structure →Input formats
- 19:5219:52, 4 December 2013 diff hist +654 Angsd structure →Input formats
- 19:3619:36, 4 December 2013 diff hist +18 Angsd structure No edit summary
- 19:3619:36, 4 December 2013 diff hist +75 Angsd structure No edit summary
- 19:3519:35, 4 December 2013 diff hist +129 Angsd structure No edit summary
- 19:3519:35, 4 December 2013 diff hist +125 Angsd structure No edit summary
- 19:3319:33, 4 December 2013 diff hist −1,005 Angsd structure →History
- 19:3119:31, 4 December 2013 diff hist +1,227 N Angsd structure Created page with " ==History== 1) A simple program to estimate the MAF based on files containing the counts of allleles (-doPhat). Used in (yu li 2009) 2) An implementation of (suyeon kim 20..."
- 19:2819:28, 4 December 2013 diff hist 0 MediaWiki:Sidebar No edit summary
- 19:2819:28, 4 December 2013 diff hist −1 MediaWiki:Sidebar No edit summary
- 19:2619:26, 4 December 2013 diff hist +36 MediaWiki:Sidebar No edit summary
- 19:1319:13, 4 December 2013 diff hist 0 MediaWiki:Sidebar No edit summary
- 18:3118:31, 4 December 2013 diff hist 0 Installation No edit summary
- 18:3018:30, 4 December 2013 diff hist 0 ANGSD No edit summary
- 18:2518:25, 4 December 2013 diff hist +8 Abbababa No edit summary
- 18:2518:25, 4 December 2013 diff hist +83 Abbababa No edit summary
- 18:0218:02, 4 December 2013 diff hist +62 Genotype Likelihoods →example
- 17:5817:58, 4 December 2013 diff hist +7 Genotype Likelihoods →example
- 17:5317:53, 4 December 2013 diff hist −2 Genotype Likelihoods →binary
- 17:3217:32, 4 December 2013 diff hist 0 Genotype Likelihoods →output genotype likelihoods