ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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16 October 2012
- 17:5017:50, 16 October 2012 diff hist +1 Bugs No edit summary
- 17:5017:50, 16 October 2012 diff hist +83 Bugs No edit summary
15 October 2012
- 12:1212:12, 15 October 2012 diff hist +9 Input →optional arguments
14 October 2012
- 02:0402:04, 14 October 2012 diff hist +54 N Bugs Created page with "1. check numSites==0 in all generals: derived classes."
12 October 2012
- 00:2300:23, 12 October 2012 diff hist +1,031 Depth →Output
- 00:2100:21, 12 October 2012 diff hist +4 Depth →Example
- 00:2100:21, 12 October 2012 diff hist +202 Depth →Example
- 00:1800:18, 12 October 2012 diff hist 0 Depth →Output
- 00:1800:18, 12 October 2012 diff hist +152 Depth →Output
- 00:1600:16, 12 October 2012 diff hist +483 Depth →Output
- 00:1500:15, 12 October 2012 diff hist −1,204 Depth →Output
- 00:1300:13, 12 October 2012 diff hist +1,632 Depth →Output
- 00:1200:12, 12 October 2012 diff hist +320 Depth No edit summary
11 October 2012
- 23:2423:24, 11 October 2012 diff hist +13 Error estimation →Error estimation from polymorphic sites
- 23:2123:21, 11 October 2012 diff hist +167 Error estimation →Output
- 23:1523:15, 11 October 2012 diff hist +95 Error estimation →options
- 23:1423:14, 11 October 2012 diff hist +164 Error estimation →Output
- 23:0923:09, 11 October 2012 diff hist +1,032 Error estimation →options
- 22:3522:35, 11 October 2012 diff hist +240 Error estimation →Error estimation from polymorphic sites
- 22:3222:32, 11 October 2012 diff hist +272 Error estimation →Error estimation from polymorphic sites
- 22:2822:28, 11 October 2012 diff hist 0 Citing angsd →Maf estimation from counts of alleles
- 22:2722:27, 11 October 2012 diff hist +62 Citing angsd →Methods
- 15:0415:04, 11 October 2012 diff hist +52 Major Minor →From genotype likelihood data
- 15:0415:04, 11 October 2012 diff hist −5 Major Minor →From genotype likelihood data
10 October 2012
- 18:3718:37, 10 October 2012 diff hist +43 SFS Estimation No edit summary
- 18:3418:34, 10 October 2012 diff hist +11 SFS Estimation No edit summary
- 18:3218:32, 10 October 2012 diff hist +39 SFS Estimation No edit summary
- 18:3118:31, 10 October 2012 diff hist +4 SFS Estimation →Example
- 18:3018:30, 10 October 2012 diff hist +202 SFS Estimation No edit summary
- 18:2418:24, 10 October 2012 diff hist 0 Citing angsd No edit summary
- 18:2318:23, 10 October 2012 diff hist +4 SFS Estimation →Example
- 18:2318:23, 10 October 2012 diff hist +252 SFS Estimation →Example
- 18:2118:21, 10 October 2012 diff hist +148 SFS Estimation No edit summary
- 18:1718:17, 10 October 2012 diff hist +570 SFS Estimation No edit summary
- 15:2615:26, 10 October 2012 diff hist +4 SFS Estimation No edit summary
- 15:2315:23, 10 October 2012 diff hist +24 SFS Estimation →realSFS
- 15:1815:18, 10 October 2012 diff hist +95 SFS Estimation →realSFS
- 15:0815:08, 10 October 2012 diff hist +14 SFS Estimation →realSFS
- 15:0715:07, 10 October 2012 diff hist −1,036 SFS Estimation No edit summary
- 14:2314:23, 10 October 2012 diff hist +98 SFS Estimation No edit summary
- 14:2214:22, 10 October 2012 diff hist −6 Beagle input No edit summary
- 14:2214:22, 10 October 2012 diff hist +23 Beagle input No edit summary
- 14:1414:14, 10 October 2012 diff hist +77 Citing angsd →Methods
- 14:1314:13, 10 October 2012 diff hist +84 Nielsen2012 No edit summary
- 14:1214:12, 10 October 2012 diff hist +85 Nielsen2012 No edit summary
- 14:1114:11, 10 October 2012 diff hist +105 N Nielsen2012 Created page with "SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data"
- 14:0614:06, 10 October 2012 diff hist 0 Genotype Likelihoods →Genotype likelihoods from alignments
- 14:0614:06, 10 October 2012 diff hist −1 Genotype Likelihoods →Genotype likelihoods from alignments
- 14:0314:03, 10 October 2012 diff hist +1 Installation →Unix
- 14:0214:02, 10 October 2012 diff hist 0 Installation →Download