ANGSD: Analysis of next generation Sequencing Data

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NGSadmix

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To estimate admixture proportions from sequencing data then you can use NGSadmix NGSadmix has it's very own webpage, because we like it so much.

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http://www.popgen.dk/software/index.php/NgsAdmix

You can generate input files for NGSadmix easily in ANGSD see Beagle_input.

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