ANGSD: Analysis of next generation Sequencing Data

Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.

Installation: Difference between revisions

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The latest version has also been modified to estimate and take into account inbreeding.
The latest version has also been modified to estimate and take into account inbreeding.
This can be found here [http://popgen.dk/software/download/angsd/angsd0.4471.inbreeding.tar.gz]
This can be found here [http://popgen.dk/software/download/angsd/angsd0.4771.inbreeding.tar.gz]


=Install=
=Install=

Revision as of 04:20, 20 October 2012

Download

The source code is avaible as a tarball and be download here [1]

Earlier versions from here: http://popgen.dk/software/download/angsd/

The latest version has also been modified to estimate and take into account inbreeding. This can be found here [2]

Install

Unpack the tarball

Unix

The software can be compiled using make

cd angsd0.4471
make

zlib needs to be installed on your system.