ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
Contamination: Difference between revisions
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Angsd can estimate contamination | Angsd can estimate contamination, but only for chromosomes that exists in one genecopy (eg chrX for males). | ||
An example are found below: | |||
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Revision as of 10:48, 27 June 2014
Angsd can estimate contamination, but only for chromosomes that exists in one genecopy (eg chrX for males).
An example are found below: