ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
Installation: Difference between revisions
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=Install= | =Install= | ||
Download and unpack the tarball, enter the directory and type make. Users on a mac computer, can use curl instead of wget. | |||
===Unix=== | ===Unix=== | ||
The software can be compiled using make. zlib needs to be installed on your system. | The software can be compiled using make. zlib needs to be installed on your system. |
Revision as of 17:54, 10 October 2013
Download
The latest version of the source code is avaible as a tarball and be download here [1]
Earlier versions from here: http://popgen.dk/software/download/angsd/
You might also be interested in a version where we allow for deviations from HWE such as inbreeding. This can be found here [2]
Install
Download and unpack the tarball, enter the directory and type make. Users on a mac computer, can use curl instead of wget.
Unix
The software can be compiled using make. zlib needs to be installed on your system.
wget http://popgen.dk/software/download/angsd/angsd0.553.tar.gz tar xfz angsd0.553.tar.gz cd angsd0.553 make cd ..
Or for users who prefer the last super stable release.
wget http://popgen.dk/software/download/angsd/angsd0.538.tar.gz tar xfz angsd0.538.tar.gz cd angsd0.538 make cd ..
Or for users who prefer the inbreeding version.
wget http://popgen.dk/software/download/angsd/angsd0.543i.tar.gz tar xfz angsd0.543i.tar.gz cd angsd0.543i make cd ..