ANGSD: Analysis of next generation Sequencing Data

Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.

Gatk: Difference between revisions

From angsd
Jump to navigation Jump to search
No edit summary
No edit summary
 
Line 2: Line 2:
=Bibtex=
=Bibtex=
<pre>
<pre>
@Article{pmid21903627,
% 20644199
   Author="Li, H. ",
@Article{pmid20644199,
   Title="{{A} statistical framework for {S}{N}{P} calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data}",
   Author="McKenna, A.  and Hanna, M.  and Banks, E.  and Sivachenko, A.  and Cibulskis, K.  and Kernytsky, A.  and Garimella, K.  and Altshuler, D.  and Gabriel, S.  and Daly, M.  and DePristo, M. A. ",
   Journal="Bioinformatics",
   Title="{{T}he {G}enome {A}nalysis {T}oolkit: a {M}ap{R}educe framework for analyzing next-generation {D}{N}{A} sequencing data}",
   Year="2011",
   Journal="Genome Res.",
   Volume="27",
   Year="2010",
   Number="21",
   Volume="20",
   Pages="2987--2993",
   Number="9",
   Month="Nov"
   Pages="1297--1303",
   Month="Sep"
}
}
</pre>
</pre>

Latest revision as of 10:43, 29 June 2013

McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, Garimella K, Altshuler D, Gabriel S, Daly M, DePristo MA (2010). The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res. 20:1297-303.

Bibtex

% 20644199 
@Article{pmid20644199,
   Author="McKenna, A.  and Hanna, M.  and Banks, E.  and Sivachenko, A.  and Cibulskis, K.  and Kernytsky, A.  and Garimella, K.  and Altshuler, D.  and Gabriel, S.  and Daly, M.  and DePristo, M. A. ",
   Title="{{T}he {G}enome {A}nalysis {T}oolkit: a {M}ap{R}educe framework for analyzing next-generation {D}{N}{A} sequencing data}",
   Journal="Genome Res.",
   Year="2010",
   Volume="20",
   Number="9",
   Pages="1297--1303",
   Month="Sep"
}

doi

doi: 10.1101/gr.107524