Latest revision as of 16:05, 26 February 2015

If you encounter bugs etc, open an issue on github, or send en email thorfinn@binf.ku.dk

Limitation

@@ Line 1: / Line 1: @@
-* fix the maxsize of a chr now its 270e6
+If you encounter bugs etc, open an issue on github, or send en email thorfinn@binf.ku.dk
-* fix queing of finished threads.
+=Limitation=
-==Limitation==
+* RG tags are not implemented, we doubt we will ever support this.
-RG tags are not implemented, we doubt we will ever support this.
-We have observed problems for rna data. This will be fixed at some point but is not a priority.
-==small changes that would be nice==
-* check numSites==0 in all generals: derived classes.
-* check if subdirs exists in outputfiles. Otherwise subtle crash.
-* Only print the
-###################
- If you have selected more than one MAF estimator we will choose in following order
-. knownminor bfgs
-. knownminor EM
-. unknownminor bfgs
-. unknownminor EM
-. Posterior maf
-###################
-If use has selected multple mafs estimators.
-* write about single bam -i on wiki
-* should rna be implemented
-* make faster the filter output