AdmixRelate

Software for infering relatedness even if the individuals are admixted. In order to infer the relatedness you will need to known the individuals admixture proportions and the allele frequencies in each of the posible populations

Installation

Download

Download folder

Installation of R package

wget http://www.popgen.dk/software/download/relateAdmix/relateAdmix_0.01.tar.gz
R CMD INSTALL relateAdmix_0.01.tar.gz

Run example

Run example using R

after installing the package you can load it into R and try the example

library(relateAdmix)
example(relate)

This shows an example of how to use the package. More information can be found in the man pages

?relate