User contributions for Albrecht

24 March 2026

• 09:3209:32, 24 March 2026 diff hist −9,802‎ AsaMap ‎ Replaced content with "The program is available and described on github: https://github.com/e-jorsboe/asaMap" current Tag: Replaced
• 09:2809:28, 24 March 2026 diff hist −6,683‎ NgsAdmix ‎ Replaced content with "NGSadmix is a tool for estimating individual admixture proportions low depth sequencing data based on genotype likelihoods The software including tutorials can be found here https://github.com/aalbrechtsen/NGSadmix" current Tag: Replaced

4 March 2024

• 19:5719:57, 4 March 2024 diff hist −18‎ EvalAdmix ‎No edit summary current

11 January 2024

• 12:1012:10, 11 January 2024 diff hist 0‎ N File:EvalAdmix.jpg ‎No edit summary current
• 12:0912:09, 11 January 2024 diff hist 0‎ EvalAdmix ‎No edit summary

24 October 2023

• 13:3213:32, 24 October 2023 diff hist 0‎ N File:Pcangsd pca.png ‎No edit summary current
• 13:2613:26, 24 October 2023 diff hist −33‎ PCAngsd ‎No edit summary current
• 13:2513:25, 24 October 2023 diff hist 0‎ N File:Pcangsd admix3.gif ‎No edit summary current
• 13:1213:12, 24 October 2023 diff hist +34‎ PCAngsd ‎No edit summary

27 December 2022

• 11:2711:27, 27 December 2022 diff hist +1‎ EvalAdmix ‎ →‎Genotype data
• 11:2611:26, 27 December 2022 diff hist 0‎ File:EvalAdmixK3.Q.png ‎ Albrecht uploaded a new version of File:EvalAdmixK3.Q.png current
• 11:2511:25, 27 December 2022 diff hist 0‎ N File:EvalAdmixK3.cor.png ‎No edit summary current
• 11:2511:25, 27 December 2022 diff hist 0‎ N File:EvalAdmixK3.Q.png ‎No edit summary
• 11:2511:25, 27 December 2022 diff hist +125‎ EvalAdmix ‎ →‎Genotype data
• 11:1611:16, 27 December 2022 diff hist −230‎ EvalAdmix ‎ →‎Run command example
• 11:1311:13, 27 December 2022 diff hist +171‎ EvalAdmix ‎ →‎Genotype data
• 11:0211:02, 27 December 2022 diff hist +39‎ EvalAdmix ‎ →‎Genotype data
• 11:0211:02, 27 December 2022 diff hist +5‎ EvalAdmix ‎ →‎Genotype data

29 May 2020

• 18:1018:10, 29 May 2020 diff hist +5‎ PCAngsdTutorial ‎ →‎Admixture based on two PC current
• 18:0918:09, 29 May 2020 diff hist −4‎ PCAngsdTutorial ‎ →‎Admixture based on 1st two PC
• 18:0818:08, 29 May 2020 diff hist +23‎ PCAngsdTutorial ‎ →‎Admixture based on 1st two PC
• 18:0718:07, 29 May 2020 diff hist +23‎ PCAngsdTutorial ‎ →‎Estimating Individual Allele Frequencies
• 18:0618:06, 29 May 2020 diff hist −1‎ PCAngsdTutorial ‎ →‎Demo 1: Allele Frequencies
• 18:0418:04, 29 May 2020 diff hist −31‎ PCAngsdTutorial ‎ →‎Download the input and population information files
• 18:0318:03, 29 May 2020 diff hist −11‎ PCAngsdTutorial ‎ →‎Create directories
• 18:0218:02, 29 May 2020 diff hist −66‎ PCAngsdTutorial ‎No edit summary
• 17:5917:59, 29 May 2020 diff hist +148‎ PCAngsd ‎ →‎Quick start
• 17:5617:56, 29 May 2020 diff hist −151‎ PCAngsd ‎ →‎Output
• 17:5117:51, 29 May 2020 diff hist −319‎ PCAngsd ‎ →‎Download and Installation
• 17:5017:50, 29 May 2020 diff hist +114‎ PCAngsd ‎ →‎Overview
• 17:4917:49, 29 May 2020 diff hist +2,215‎ PCAngsd ‎No edit summary

27 April 2020

• 11:4811:48, 27 April 2020 diff hist +368‎ EMU ‎ →‎Run example
• 11:3011:30, 27 April 2020 diff hist +112‎ EMU ‎No edit summary

24 September 2019

• 14:3614:36, 24 September 2019 diff hist +3‎ IBSrelate ‎ →‎Examine the results current
• 14:3614:36, 24 September 2019 diff hist +4‎ IBSrelate ‎ →‎run IBS, this will analyse each pair of individuals
• 14:3514:35, 24 September 2019 diff hist −1‎ IBSrelate ‎ →‎What data type is required for these analysis?
• 14:3414:34, 24 September 2019 diff hist +648‎ IBSrelate ‎ →‎Frequently asked Questions
• 14:2714:27, 24 September 2019 diff hist +638‎ IBSrelate ‎ →‎How will inbreeding affects the estimates produces here?
• 14:0314:03, 24 September 2019 diff hist −2‎ IBSrelate ‎ →‎How can the quality of the reference genome assembly affect R0, R1, or KING-robust kinship estimates?
• 14:0314:03, 24 September 2019 diff hist +544‎ IBSrelate ‎ →‎How can reference genome assembly errors affect R0, R1, or KING-robust kinship estimates?
• 13:5413:54, 24 September 2019 diff hist +1,396‎ IBSrelate ‎ →‎How can reference genome assembly errors affect R0, R1, or KING-robust kinship estimates?
• 13:3213:32, 24 September 2019 diff hist +293‎ IBSrelate ‎ →‎Can I estimate R0, R1, or KING-robust kinship even if my reference genome is not assembled into chromosomes?
• 13:2913:29, 24 September 2019 diff hist +6‎ IBSrelate ‎ →‎How can I estimate confidence intervals around my R0, R1, or KING-robust kinship estimates?
• 13:2913:29, 24 September 2019 diff hist +9‎ IBSrelate ‎ →‎How can I estimate confidence intervals around my R0, R1, or KING-robust kinship estimates?
• 13:2413:24, 24 September 2019 diff hist +593‎ IBSrelate ‎ →‎How can I estimate confidence intervals around my R0, R1, or KING-robust kinship estimates?
• 13:1513:15, 24 September 2019 diff hist +139‎ IBSrelate ‎ →‎How can I estimate confidence intervals around my R0, R1, or KING-robust kinship estimates?
• 13:1413:14, 24 September 2019 diff hist +388‎ IBSrelate ‎ →‎How can I estimate confidence intervals around my R0, R1, or KING-robust kinship estimates?
• 13:0613:06, 24 September 2019 diff hist +171‎ IBSrelate ‎ →‎How can I estimate confidence intervals around my R0, R1, or KING-robust kinship estimates?
• 13:0113:01, 24 September 2019 diff hist +1,023‎ IBSrelate ‎ →‎I run out of RAM running IBS or realSFS on my entire data set, what should I do?
• 11:3411:34, 24 September 2019 diff hist +501‎ IBSrelate ‎No edit summary