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Software for genetic analysis | Software for genetic analysis | ||
= [http://www.popgen.dk/angsd ANGSD] = | |||
Analysis of Next Generation Sequencing Data | |||
<classdiagram type="dir:LR"> | |||
[sequence data]->[genotype;likelihoods] | |||
[genotype;likelihoods]->[genotype;probabilities] | |||
[sequence files|bam files;SOAP files{bg:orange}]->[sequence data] | |||
[glf files|glfv3;soapSNP{bg:orange}]->[genotype;likelihoods] | |||
[genotype prob|beagle output{bg:orange}]->[genotype;probabilities] | |||
</classdiagram> | |||
Revision as of 10:04, 15 August 2013
Software for genetic analysis
ANGSD
Analysis of Next Generation Sequencing Data
<classdiagram type="dir:LR"> [sequence data]->[genotype;likelihoods] [genotype;likelihoods]->[genotype;probabilities] [sequence files|bam files;SOAP files{bg:orange}]->[sequence data] [glf files|glfv3;soapSNP{bg:orange}]->[genotype;likelihoods] [genotype prob|beagle output{bg:orange}]->[genotype;probabilities] </classdiagram>