ANGSD: Analysis of next generation Sequencing Data
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MsToGlf: Difference between revisions
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For the [[Korneliussen2013]] paper, we simulated data according to genotypes simulated from ms/msms output. For this we used the msToGlf program found in the 'misc/' subfolder of the angsd tar ball. | For the [[Korneliussen2013]] paper, we simulated data according to genotypes simulated from ms/msms output. For this we used the msToGlf program found in the 'misc/' subfolder of the angsd tar ball. | ||
;Sorry about the total lack of information for this program. | |||
=Brief Overview= | =Brief Overview= | ||
<pre> | <pre> | ||
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also -err -depth -depthFile -singleOut -regLen -nind | also -err -depth -depthFile -singleOut -regLen -nind | ||
</pre> | </pre> | ||
;-in ms/msms outputfilename | |||
;-out prefix outputfilename | |||
=Examples= | =Examples= | ||
Revision as of 22:44, 10 February 2014
For the Korneliussen2013 paper, we simulated data according to genotypes simulated from ms/msms output. For this we used the msToGlf program found in the 'misc/' subfolder of the angsd tar ball.
- Sorry about the total lack of information for this program.
Brief Overview
./msToGlf Probs with args, supply -in -out also -err -depth -depthFile -singleOut -regLen -nind
- -in ms/msms outputfilename
- -out prefix outputfilename