ANGSD: Analysis of next generation Sequencing Data

Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.

Installation: Difference between revisions

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Earlier versions from here: http://popgen.dk/software/download/angsd/
Earlier versions from here: http://popgen.dk/software/download/angsd/
An earlier version has been modified (by Filipe Vieira) to estimate and take into account inbreeding for some analysis. This version has not been tested and validated.


=Install=
=Install=

Revision as of 09:48, 25 June 2013

Download

The latest version of the source code is avaible as a tarball and be download here [1]

Earlier versions from here: http://popgen.dk/software/download/angsd/

Install

Unpack the tarball

Unix

The software can be compiled using make

wget http://popgen.dk/software/download/angsd/angsd0.539.tar.gz
tar xfz angsd0.539.tar.gz
cd angsd0.539
make
cd ..

zlib needs to be installed on your system.