ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
Installation: Difference between revisions
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cd .. | cd .. | ||
</pre> | </pre> | ||
The executable then located in '''angsd0. | The executable then located in '''angsd0.609/angsd'''. | ||
;NB the program also compiles a static version called '''angsd0. | ;NB the program also compiles a static version called '''angsd0.609/angsd''' which could be usefull. | ||
Revision as of 11:54, 30 June 2014
Download
The latest version of the source code is avaible as a tarball and be download here [1]
Earlier versions from here: http://popgen.dk/software/download/angsd/
Install
Download and unpack the tarball, enter the directory and type make. Users on a mac computer, can use curl instead of wget.
Unix
The software can be compiled using make. zlib needs to be installed on your system.
wget http://popgen.dk/software/download/angsd/angsd0.609.tar.gz tar xfz angsd0.609.tar.gz cd angsd0.609 make cd ..
The executable then located in angsd0.609/angsd.
- NB the program also compiles a static version called angsd0.609/angsd which could be usefull.