ANGSD: Analysis of next generation Sequencing Data

Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.

Installation: Difference between revisions

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The software can be compiled using make. zlib needs to be installed on your system.
The software can be compiled using make. zlib needs to be installed on your system.
<pre>
<pre>
wget http://popgen.dk/software/download/angsd/angsd0.602.tar.gz
wget http://popgen.dk/software/download/angsd/angsd0.603.tar.gz
tar xfz angsd0.602.tar.gz
tar xfz angsd0.603.tar.gz
cd angsd0.602
cd angsd0.603
make
make
cd ..
cd ..
</pre>
</pre>

Revision as of 12:18, 20 June 2014

Download

The latest version of the source code is avaible as a tarball and be download here [1]

Earlier versions from here: http://popgen.dk/software/download/angsd/

Install

Download and unpack the tarball, enter the directory and type make. Users on a mac computer, can use curl instead of wget.

Unix

The software can be compiled using make. zlib needs to be installed on your system.

wget http://popgen.dk/software/download/angsd/angsd0.603.tar.gz
tar xfz angsd0.603.tar.gz
cd angsd0.603
make
cd ..