ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
Authors: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| Line 8: | Line 8: | ||
anders albrechtsen | anders albrechtsen | ||
albrecht@binf.ku.dk | albrecht@binf.ku.dk | ||
---- | |||
Fililpe Vieira has been implementing changes to the frequency estimator. | Fililpe Vieira has been implementing changes to the frequency estimator. | ||
Latest revision as of 13:50, 28 June 2013
Major programmer
Thorfinn Korneliussen thorfinn@binf.ku.dk
Minor programmer
anders albrechtsen albrecht@binf.ku.dk
Fililpe Vieira has been implementing changes to the frequency estimator. analysisMaf.cpp -> analysisMaf.inbreed.cpp some changes in angsd_realSFS.cpp And the analysisHWE.cpp
Matteo has been implementing the Fst and PCA which uses output from angsd.
Other people include
Rasmus Nielsen rasmus@binf.ku.dk
Line Skotte flotte@skotte.dk
Disclaimer
Some code is very 'inspired' by SAMtools (bamfile reading GL -1). The code for the SOAPsnp GL estimator is also very inspired by SOAPsnp