ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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4 December 2015
- 14:0714:07, 4 December 2015 diff hist −130 ANGSD →Synopsis current
- 13:5813:58, 4 December 2015 diff hist +1 Quick Start No edit summary current
- 13:5813:58, 4 December 2015 diff hist −1 Quick Start No edit summary
- 13:5613:56, 4 December 2015 diff hist +72 Major Minor →Brief Overview current
- 13:5313:53, 4 December 2015 diff hist +1,140 RealSFS →Brief overview
- 13:5213:52, 4 December 2015 diff hist −129 RealSFS No edit summary
- 13:5113:51, 4 December 2015 diff hist 0 Input →options
- 13:4513:45, 4 December 2015 diff hist +73 Input →Pileup files
- 09:4209:42, 4 December 2015 diff hist +16 Input →Genotype Likelihood Files
- 09:4009:40, 4 December 2015 diff hist +1 Input →Genotype Likelihood Files
- 09:3609:36, 4 December 2015 diff hist +35 Input →glf
- 09:3609:36, 4 December 2015 diff hist +54 Input →glf
- 09:2809:28, 4 December 2015 diff hist +30 Input →glf
- 09:1009:10, 4 December 2015 diff hist +428 Input →Brief Overview
- 09:0509:05, 4 December 2015 diff hist −1 ANGSD No edit summary
- 09:0509:05, 4 December 2015 diff hist −2 ANGSD No edit summary
- 09:0509:05, 4 December 2015 diff hist −217 ANGSD No edit summary
- 09:0409:04, 4 December 2015 diff hist −4 ANGSD No edit summary
- 09:0109:01, 4 December 2015 diff hist 0 Input No edit summary
26 November 2015
- 13:2213:22, 26 November 2015 diff hist +252 Error estimation →Output
23 November 2015
- 12:2612:26, 23 November 2015 diff hist +495 Fst →Sliding Window output
20 November 2015
- 13:2913:29, 20 November 2015 diff hist −11 SFS Estimation No edit summary
- 13:2913:29, 20 November 2015 diff hist +354 SFS Estimation →How to plot
- 03:1803:18, 20 November 2015 diff hist 0 Installation No edit summary
- 03:1603:16, 20 November 2015 diff hist +60 Change log →Latests
- 03:1603:16, 20 November 2015 diff hist 0 MediaWiki:Sitenotice No edit summary
- 02:5002:50, 20 November 2015 diff hist +53 SFS Estimation No edit summary
16 November 2015
- 15:0015:00, 16 November 2015 diff hist +1 Sites →Bedfiles? current
- 14:0414:04, 16 November 2015 diff hist +99 Abbababa No edit summary
14 November 2015
- 02:2802:28, 14 November 2015 diff hist +84 Installation No edit summary
- 02:1302:13, 14 November 2015 diff hist 0 Installation →Install from github
- 02:1202:12, 14 November 2015 diff hist 0 Installation →Unix
- 01:5301:53, 14 November 2015 diff hist +41 Installation →Install from github
- 01:4901:49, 14 November 2015 diff hist +38 Installation →Unix
7 November 2015
- 00:5500:55, 7 November 2015 diff hist −249 ANGSD No edit summary
- 00:5500:55, 7 November 2015 diff hist +249 ANGSD No edit summary
19 October 2015
- 17:5217:52, 19 October 2015 diff hist −79 Thetas,Tajima,Neutrality tests →Unknown ancestral state (folded sfs)
- 17:5217:52, 19 October 2015 diff hist +1 Thetas,Tajima,Neutrality tests →Step 1: Finding a 'global estimate' of the SFS
- 17:5117:51, 19 October 2015 diff hist +1 Thetas,Tajima,Neutrality tests updatated the examples for latest version of realSFS, thanks kebi
- 17:5017:50, 19 October 2015 diff hist +1 Thetas,Tajima,Neutrality tests →Full command list for below examples
13 October 2015
- 00:0600:06, 13 October 2015 diff hist +162 Fst No edit summary
8 October 2015
- 17:3817:38, 8 October 2015 diff hist −4 Pbs No edit summary current
31 August 2015
- 09:0809:08, 31 August 2015 diff hist +149 Citing angsd →Contamination current
24 August 2015
- 13:1713:17, 24 August 2015 diff hist 0 Input →Brief Overview
21 August 2015
30 July 2015
- 18:2218:22, 30 July 2015 diff hist +65 Fst No edit summary
- 18:2218:22, 30 July 2015 diff hist +9 Fst No edit summary
- 18:2118:21, 30 July 2015 diff hist +244 Fst No edit summary
- 15:4015:40, 30 July 2015 diff hist 0 Installation →Unix
- 15:4015:40, 30 July 2015 diff hist 0 Installation →Download and Installation