ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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6 December 2013
- 13:4813:48, 6 December 2013 diff hist 0 File:Error1.png Thorfinn uploaded a new version of "File:Error1.png" current
- 13:4513:45, 6 December 2013 diff hist 0 File:Error1.png Thorfinn uploaded a new version of "File:Error1.png"
- 13:4013:40, 6 December 2013 diff hist −52 Error estimation →Output
- 13:4013:40, 6 December 2013 diff hist +53 Error estimation →Output
- 13:3713:37, 6 December 2013 diff hist +26 Error estimation →Output
- 13:3613:36, 6 December 2013 diff hist +26 Error estimation →Output
- 13:3513:35, 6 December 2013 diff hist 0 N File:Error2.png No edit summary
- 13:3513:35, 6 December 2013 diff hist 0 File:Error1.png Thorfinn uploaded a new version of "File:Error1.png"
- 13:3313:33, 6 December 2013 diff hist 0 N File:Error1.png No edit summary
- 13:2713:27, 6 December 2013 diff hist 0 N File:Error1.pdf No edit summary current
- 13:2113:21, 6 December 2013 diff hist +299 Error estimation →Output
- 12:5512:55, 6 December 2013 diff hist −20 Error estimation →extra options
- 12:5212:52, 6 December 2013 diff hist −4 Error estimation →Brief Overview
- 12:5012:50, 6 December 2013 diff hist +574 Error estimation →Error estimation from polymorphic sites
- 12:4012:40, 6 December 2013 diff hist +157 Error estimation No edit summary
- 10:5510:55, 6 December 2013 diff hist +1,470 Error estimation →Method 2
- 10:5410:54, 6 December 2013 diff hist +35 Error estimation →Output
- 10:5410:54, 6 December 2013 diff hist 0 Error estimation →output
- 10:5410:54, 6 December 2013 diff hist +10 Error estimation No edit summary
- 10:5210:52, 6 December 2013 diff hist +69 Error estimation No edit summary
- 10:3310:33, 6 December 2013 diff hist −1 Error estimation →output
- 09:5809:58, 6 December 2013 diff hist +203 Error estimation No edit summary
- 01:5701:57, 6 December 2013 diff hist +20 User:Thorfinn No edit summary
5 December 2013
- 19:2919:29, 5 December 2013 diff hist +38 User:Thorfinn No edit summary
- 18:0518:05, 5 December 2013 diff hist +12 User:Thorfinn No edit summary
- 18:0518:05, 5 December 2013 diff hist +916 N User:Thorfinn Created page with "Thorfinns angsd todolist 1) write error estimation on wiki, need more info 2) Rscript ../../angsd0.565/R/estError.R Loading required package: remix Loading required package..."
- 17:4317:43, 5 December 2013 diff hist +76 Error estimation No edit summary
4 December 2013
- 19:0319:03, 4 December 2013 diff hist −18 Angsd structure No edit summary current
- 18:5518:55, 4 December 2013 diff hist +517 Angsd structure →Analysis
- 18:5418:54, 4 December 2013 diff hist +13 Angsd structure →Input formats
- 18:5218:52, 4 December 2013 diff hist +2 Angsd structure →Input formats
- 18:5218:52, 4 December 2013 diff hist +654 Angsd structure →Input formats
- 18:3618:36, 4 December 2013 diff hist +18 Angsd structure No edit summary
- 18:3618:36, 4 December 2013 diff hist +75 Angsd structure No edit summary
- 18:3518:35, 4 December 2013 diff hist +129 Angsd structure No edit summary
- 18:3518:35, 4 December 2013 diff hist +125 Angsd structure No edit summary
- 18:3318:33, 4 December 2013 diff hist −1,005 Angsd structure →History
- 18:3118:31, 4 December 2013 diff hist +1,227 N Angsd structure Created page with " ==History== 1) A simple program to estimate the MAF based on files containing the counts of allleles (-doPhat). Used in (yu li 2009) 2) An implementation of (suyeon kim 20..."
- 18:2818:28, 4 December 2013 diff hist 0 MediaWiki:Sidebar No edit summary
- 18:2818:28, 4 December 2013 diff hist −1 MediaWiki:Sidebar No edit summary
- 18:2618:26, 4 December 2013 diff hist +36 MediaWiki:Sidebar No edit summary
- 18:1318:13, 4 December 2013 diff hist 0 MediaWiki:Sidebar No edit summary
- 17:3117:31, 4 December 2013 diff hist 0 Installation No edit summary
- 17:3017:30, 4 December 2013 diff hist 0 ANGSD No edit summary
- 17:2517:25, 4 December 2013 diff hist +8 Abbababa No edit summary
- 17:2517:25, 4 December 2013 diff hist +83 Abbababa No edit summary
- 17:0217:02, 4 December 2013 diff hist +62 Genotype Likelihoods →example
- 16:5816:58, 4 December 2013 diff hist +7 Genotype Likelihoods →example
- 16:5316:53, 4 December 2013 diff hist −2 Genotype Likelihoods →binary
- 16:3216:32, 4 December 2013 diff hist 0 Genotype Likelihoods →output genotype likelihoods