ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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16 July 2013
- 16:4916:49, 16 July 2013 diff hist 0 MediaWiki:Sidebar No edit summary
- 16:4916:49, 16 July 2013 diff hist +24 MediaWiki:Sidebar No edit summary
- 16:4816:48, 16 July 2013 diff hist +7 NGSadmix No edit summary
- 16:4716:47, 16 July 2013 diff hist −4 NGSadmix No edit summary
- 16:4716:47, 16 July 2013 diff hist −1 NGSadmix No edit summary
- 16:4616:46, 16 July 2013 diff hist +19 NGSadmix No edit summary
- 16:4516:45, 16 July 2013 diff hist +2 NGSadmix No edit summary
- 16:4516:45, 16 July 2013 diff hist +62 N NGSadmix Created page with "NGSadmix has it's very own webpage. [wwww.popgen.dk/software]"
4 July 2013
- 13:1413:14, 4 July 2013 diff hist +34 Bugs →Bugs
2 July 2013
- 12:5912:59, 2 July 2013 diff hist +97 HWE and Inbreeding estimates →HWE and Inbreeding estimates
30 June 2013
- 16:3016:30, 30 June 2013 diff hist −20 Genotype likelihoods from alignments new →Brief Overview
- 16:3016:30, 30 June 2013 diff hist +485 Genotype likelihoods from alignments new No edit summary
- 16:2416:24, 30 June 2013 diff hist 0 Genotype likelihoods from alignments new No edit summary
- 16:2416:24, 30 June 2013 diff hist +3 Genotype likelihoods from alignments new No edit summary
- 16:2416:24, 30 June 2013 diff hist +193 Genotype likelihoods from alignments new No edit summary
- 16:1616:16, 30 June 2013 diff hist +4,458 N Genotype likelihoods from alignments new Created page with "=Genotype likelihoods from alignments= <classdiagram> // [input|bam files;SOAP files{bg:orange}]->[sequence data] [sequence data]->[genotype likelihoods|SAMtools;GATK;SOAPsnp..."
- 16:1516:15, 30 June 2013 diff hist −79 ANGSD No edit summary
29 June 2013
- 11:0211:02, 29 June 2013 diff hist +70 Association →Output
- 10:5810:58, 29 June 2013 diff hist −1 Association →Output
- 10:5810:58, 29 June 2013 diff hist 0 Association →Output
- 10:5810:58, 29 June 2013 diff hist +6 Association →Output
- 10:5010:50, 29 June 2013 diff hist +8 Association →Citations
- 10:4910:49, 29 June 2013 diff hist +52 Association →Citations
- 10:4610:46, 29 June 2013 diff hist +12 Association No edit summary
- 10:4310:43, 29 June 2013 diff hist +154 Gatk No edit summary current
- 10:4210:42, 29 June 2013 diff hist +395 Gatk No edit summary
- 10:4010:40, 29 June 2013 diff hist +1 Citing angsd No edit summary
- 10:3810:38, 29 June 2013 diff hist +6 Li2011 No edit summary current
- 10:3810:38, 29 June 2013 diff hist 0 Citing angsd →Genotype likelihoods
- 10:3710:37, 29 June 2013 diff hist +587 N Li2011 Created page with "A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data. Bioinformatics, 27, 21:298..."
- 10:3110:31, 29 June 2013 diff hist +337 Nielsen2012 No edit summary current
- 10:2710:27, 29 June 2013 diff hist 0 Skotte2012 No edit summary current
- 10:1110:11, 29 June 2013 diff hist 0 Association →Output
- 10:1110:11, 29 June 2013 diff hist −62 Association →Output
- 10:0610:06, 29 June 2013 diff hist +98 Association →Output
- 10:0610:06, 29 June 2013 diff hist +41 N Maf Redirected page to Allele Frequency estimation current
- 10:0110:01, 29 June 2013 diff hist +1 Association →Output
- 10:0110:01, 29 June 2013 diff hist +14 Association →Output
- 10:0010:00, 29 June 2013 diff hist +93 Association →Output
- 09:5709:57, 29 June 2013 diff hist +47 N MajorMinor Redirected page to Inferring Major and Minor alleles current
- 09:5309:53, 29 June 2013 diff hist −7 Association →Output
- 09:4709:47, 29 June 2013 diff hist −17 Association →Output
- 09:3809:38, 29 June 2013 diff hist −37 Association →Output
- 09:3709:37, 29 June 2013 diff hist +26 Association →Output
- 09:3609:36, 29 June 2013 diff hist +14 Association →Output
- 09:3409:34, 29 June 2013 diff hist +3 Association →Output
- 09:3409:34, 29 June 2013 diff hist +64 Association →Output
- 09:3309:33, 29 June 2013 diff hist +3 Association →Output
- 09:3209:32, 29 June 2013 diff hist +105 Association →Output
- 09:2909:29, 29 June 2013 diff hist +20 Association →Output