ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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28 June 2013
- 13:2813:28, 28 June 2013 diff hist +60 Association No edit summary
- 13:2613:26, 28 June 2013 diff hist +1 Association No edit summary
- 13:1313:13, 28 June 2013 diff hist −15 Association No edit summary
- 13:1313:13, 28 June 2013 diff hist −15 Association No edit summary
- 12:5812:58, 28 June 2013 diff hist +37 ANGSD No edit summary
- 12:5012:50, 28 June 2013 diff hist +6 Authors No edit summary current
- 12:5012:50, 28 June 2013 diff hist +253 Authors No edit summary
27 June 2013
- 14:2114:21, 27 June 2013 diff hist +85 Filters No edit summary
- 14:2014:20, 27 June 2013 diff hist −108 Filters No edit summary
25 June 2013
- 13:0313:03, 25 June 2013 diff hist +41 Fst PCA No edit summary
- 12:5612:56, 25 June 2013 diff hist −56 Fst PCA No edit summary
- 12:5512:55, 25 June 2013 diff hist −6 Fst PCA No edit summary
- 12:5512:55, 25 June 2013 diff hist +313 Fst PCA No edit summary
- 12:4212:42, 25 June 2013 diff hist +179 N Fst PCA Created page with "Matteo Fumagalli has been working on methods to estimate Fst and doing PCA based on ANGSD output files. =Fst= # Generate .sfs files from each population using ANGSD [[RealSFS..."
- 12:3512:35, 25 June 2013 diff hist +9 MediaWiki:Sidebar No edit summary
- 12:3312:33, 25 June 2013 diff hist +51 HWE and Inbreeding estimates No edit summary
- 12:3212:32, 25 June 2013 diff hist +32 HWE and Inbreeding estimates No edit summary
- 12:2812:28, 25 June 2013 diff hist +1,091 HWE and Inbreeding estimates No edit summary
- 12:2612:26, 25 June 2013 diff hist 0 ANGSD No edit summary
- 12:0412:04, 25 June 2013 diff hist +65 MediaWiki:Sidebar No edit summary
- 08:4808:48, 25 June 2013 diff hist −169 Installation No edit summary
- 08:4708:47, 25 June 2013 diff hist −117 Installation No edit summary
14 June 2013
- 11:1611:16, 14 June 2013 diff hist +236 Change log No edit summary
- 11:0311:03, 14 June 2013 diff hist 0 Installation No edit summary
- 11:0311:03, 14 June 2013 diff hist 0 ANGSD No edit summary
- 00:3200:32, 14 June 2013 diff hist 0 Installation No edit summary
- 00:2600:26, 14 June 2013 diff hist 0 ANGSD No edit summary
- 00:0500:05, 14 June 2013 diff hist +204 Change log →Version notes
25 May 2013
- 01:1601:16, 25 May 2013 diff hist +177 Thetas,Tajima,Neutrality tests No edit summary
24 May 2013
- 15:3915:39, 24 May 2013 diff hist 0 Installation No edit summary
23 May 2013
- 14:2114:21, 23 May 2013 diff hist 0 Installation No edit summary
- 14:2014:20, 23 May 2013 diff hist 0 ANGSD No edit summary
20 May 2013
- 15:5215:52, 20 May 2013 diff hist 0 ANGSD No edit summary
- 15:5215:52, 20 May 2013 diff hist 0 Installation No edit summary
7 May 2013
- 08:3808:38, 7 May 2013 diff hist 0 Installation No edit summary
- 08:3708:37, 7 May 2013 diff hist 0 ANGSD No edit summary
6 May 2013
- 23:4223:42, 6 May 2013 diff hist +80 Input →optional arguments
5 May 2013
- 10:4710:47, 5 May 2013 diff hist 0 Installation No edit summary
- 10:4710:47, 5 May 2013 diff hist 0 ANGSD No edit summary
3 May 2013
- 08:5608:56, 3 May 2013 diff hist +1 Tutorial →Understanding angsd output
- 06:4406:44, 3 May 2013 diff hist −3 Tutorial →Getting simple Counts/depth
- 06:3706:37, 3 May 2013 diff hist +35 Tutorial No edit summary
- 02:2802:28, 3 May 2013 diff hist 0 Genotype calling →example
- 02:2402:24, 3 May 2013 diff hist −19 Genotype calling →Genotype calling
- 02:2102:21, 3 May 2013 diff hist 0 Genotype calling →example
- 02:0902:09, 3 May 2013 diff hist −418 Tutorial →Estimating the SFS
- 02:0302:03, 3 May 2013 diff hist +612 Tutorial →Getting simple Counts/depth
- 01:5901:59, 3 May 2013 diff hist −39 Tutorial →Estimating the SFS
- 01:5601:56, 3 May 2013 diff hist +36 Tutorial →Estimating the SFS
- 01:5501:55, 3 May 2013 diff hist −1 Tutorial →Estimating the SFS