ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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16 October 2012
- 16:5016:50, 16 October 2012 diff hist +1 Bugs No edit summary
- 16:5016:50, 16 October 2012 diff hist +83 Bugs No edit summary
15 October 2012
- 11:1211:12, 15 October 2012 diff hist +9 Input →optional arguments
14 October 2012
- 01:0401:04, 14 October 2012 diff hist +54 N Bugs Created page with "1. check numSites==0 in all generals: derived classes."
11 October 2012
- 23:2323:23, 11 October 2012 diff hist +1,031 Depth →Output
- 23:2123:21, 11 October 2012 diff hist +4 Depth →Example
- 23:2123:21, 11 October 2012 diff hist +202 Depth →Example
- 23:1823:18, 11 October 2012 diff hist 0 Depth →Output
- 23:1823:18, 11 October 2012 diff hist +152 Depth →Output
- 23:1623:16, 11 October 2012 diff hist +483 Depth →Output
- 23:1523:15, 11 October 2012 diff hist −1,204 Depth →Output
- 23:1323:13, 11 October 2012 diff hist +1,632 Depth →Output
- 23:1223:12, 11 October 2012 diff hist +320 Depth No edit summary
- 22:2422:24, 11 October 2012 diff hist +13 Error estimation →Error estimation from polymorphic sites
- 22:2122:21, 11 October 2012 diff hist +167 Error estimation →Output
- 22:1522:15, 11 October 2012 diff hist +95 Error estimation →options
- 22:1422:14, 11 October 2012 diff hist +164 Error estimation →Output
- 22:0922:09, 11 October 2012 diff hist +1,032 Error estimation →options
- 21:3521:35, 11 October 2012 diff hist +240 Error estimation →Error estimation from polymorphic sites
- 21:3221:32, 11 October 2012 diff hist +272 Error estimation →Error estimation from polymorphic sites
- 21:2821:28, 11 October 2012 diff hist 0 Citing angsd →Maf estimation from counts of alleles
- 21:2721:27, 11 October 2012 diff hist +62 Citing angsd →Methods
- 14:0414:04, 11 October 2012 diff hist +52 Major Minor →From genotype likelihood data
- 14:0414:04, 11 October 2012 diff hist −5 Major Minor →From genotype likelihood data
10 October 2012
- 17:3717:37, 10 October 2012 diff hist +43 SFS Estimation No edit summary
- 17:3417:34, 10 October 2012 diff hist +11 SFS Estimation No edit summary
- 17:3217:32, 10 October 2012 diff hist +39 SFS Estimation No edit summary
- 17:3117:31, 10 October 2012 diff hist +4 SFS Estimation →Example
- 17:3017:30, 10 October 2012 diff hist +202 SFS Estimation No edit summary
- 17:2417:24, 10 October 2012 diff hist 0 Citing angsd No edit summary
- 17:2317:23, 10 October 2012 diff hist +4 SFS Estimation →Example
- 17:2317:23, 10 October 2012 diff hist +252 SFS Estimation →Example
- 17:2117:21, 10 October 2012 diff hist +148 SFS Estimation No edit summary
- 17:1717:17, 10 October 2012 diff hist +570 SFS Estimation No edit summary
- 14:2614:26, 10 October 2012 diff hist +4 SFS Estimation No edit summary
- 14:2314:23, 10 October 2012 diff hist +24 SFS Estimation →realSFS
- 14:1814:18, 10 October 2012 diff hist +95 SFS Estimation →realSFS
- 14:0814:08, 10 October 2012 diff hist +14 SFS Estimation →realSFS
- 14:0714:07, 10 October 2012 diff hist −1,036 SFS Estimation No edit summary
- 13:2313:23, 10 October 2012 diff hist +98 SFS Estimation No edit summary
- 13:2213:22, 10 October 2012 diff hist −6 Beagle input No edit summary
- 13:2213:22, 10 October 2012 diff hist +23 Beagle input No edit summary
- 13:1413:14, 10 October 2012 diff hist +77 Citing angsd →Methods
- 13:1313:13, 10 October 2012 diff hist +84 Nielsen2012 No edit summary
- 13:1213:12, 10 October 2012 diff hist +85 Nielsen2012 No edit summary
- 13:1113:11, 10 October 2012 diff hist +105 N Nielsen2012 Created page with "SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data"
- 13:0613:06, 10 October 2012 diff hist 0 Genotype Likelihoods →Genotype likelihoods from alignments
- 13:0613:06, 10 October 2012 diff hist −1 Genotype Likelihoods →Genotype likelihoods from alignments
- 13:0313:03, 10 October 2012 diff hist +1 Installation →Unix
- 13:0213:02, 10 October 2012 diff hist 0 Installation →Download