ANGSD: Analysis of next generation Sequencing Data
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- # BAM files ...s. A thorough description of the BAM reading can be found in [[BAM reading details]] ...2 KB (269 words) - 20:03, 4 December 2013
- ...the ANGSD program. We assume you will have SAMtools installed for general BAM/CRAM manipulation ==BAM files from 1000genomes project== ...8 KB (1,080 words) - 14:58, 4 December 2015
- ...mit the analysis to informative sites, and in the case of alignement data (BAM), we advise that users filter away the low mapping quality reads and the lo ...lihoods ratio test for differences between cases and controls described in details in [[Kim2011]]. ...22 KB (3,264 words) - 15:32, 7 June 2023