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...elihood of the estimates: a .log file that summarizes the run. The Command line used for running the program, what the likelihood is every 50 iterations, a ...llele frequency in each of the 3 assumed ancestral populations. There is a line for each locus. ...

...elihood of the estimates: a .log file that summarizes the run. The Command line used for running the program, what the likelihood is every 50 iterations, a ...llele frequency in each of the 3 assumed ancestral populations. There is a line for each locus. ...

...ch there are GLs plus one (as the command includes the count of the header line): ...llele frequency in each of the 3 assumed ancestral populations (there is a line for each locus). ...

Or install from the command line * 0.08 fixed a bug that would sometimes print an extra line when multiple threaded ...

install R package from command line ...

Small usefull command line program called '''grepper''' which is a usefull to complement POSIX '''grep ...

the extracted line are returned to standard out. ...ific lines, or "keys". The linenumbers to extract must be 1-indexed (first line i 1). When using keys, you must supply which column to 'grep' for. The prog ...

...a tab delimited N times N symmetric correlation matrix, where column i in line j contains the correlation of residuals between individual i and j, and the ...

A phenotype also has to be provided, this should just be text file with one line for each individual in the .fam file, sorted in the same way: ...

...ch there are GLs plus one (as the command includes the count of the header line): ...

; -haploid [FLAG] (Only write '-haploid' in command line) For analysing all the *.beagle files in a directory using a one-line command one can use xargs: ...