NgsAdmix: Difference between revisions
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This will contain the program called NGSadmix, which is a very nice tool for finding admixture. It is based on genotype likelihoods or genotype probabilities. | This will contain the program called NGSadmix, which is a very nice tool for finding admixture. It is based on genotype likelihoods or genotype probabilities. | ||
It is a fancy multithreaded c/c++ program. | |||
=Installation= | =Installation= | ||
| Line 7: | Line 8: | ||
g++ ngsadmix32.cpp -O3 -lpthread -lz -o NGSadmix | g++ ngsadmix32.cpp -O3 -lpthread -lz -o NGSadmix | ||
</pre> | </pre> | ||
=Input Files= | |||
The possible input files are beagle | |||
Revision as of 10:15, 25 June 2013
This will contain the program called NGSadmix, which is a very nice tool for finding admixture. It is based on genotype likelihoods or genotype probabilities. It is a fancy multithreaded c/c++ program.
Installation
wget popgen.dk/software/NGSadmix/ngsadmix32.cpp g++ ngsadmix32.cpp -O3 -lpthread -lz -o NGSadmix
Input Files
The possible input files are beagle
log
- v32 june 25-2013; modified code such that it now compiles on OSX
- v31 june 24-2013; First public version.