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(Created page with "Small fast cprogram to extract bases from a fasta file.") |
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Small fast cprogram to extract bases from a fasta file. | Small fast cprogram to extract bases from a fasta file. | ||
=Example= | |||
Generate samtools chr pos ref doing | |||
<pre> | |||
samtools mpileup -b smallBam.filelist -f /space/genomes/refgenomes/hg19/merged/hg19NoChr.fa |cut -f1-3 >small.sam | |||
</pre> | |||
Revision as of 15:50, 12 March 2014
Small fast cprogram to extract bases from a fasta file.
Example
Generate samtools chr pos ref doing
samtools mpileup -b smallBam.filelist -f /space/genomes/refgenomes/hg19/merged/hg19NoChr.fa |cut -f1-3 >small.sam