Name | Last modified | Size | Description | |
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Parent Directory | - | |||
AUTHORS | 2013-09-21 02:53 | 1.4K | ||
LICENSE | 2013-09-21 02:53 | 34K | ||
Makefile | 2013-09-21 02:53 | 4.1K | ||
R/ | 2013-09-21 02:53 | - | ||
analysisAnsError.cpp | 2013-09-21 02:53 | 4.9K | ||
analysisAsso.cpp | 2013-09-21 02:53 | 25K | ||
analysisCallGenotypes.cpp | 2013-09-21 02:53 | 6.1K | ||
analysisCount.cpp | 2013-09-21 02:53 | 11K | ||
analysisCovar.cpp | 2013-09-21 02:53 | 6.3K | ||
analysisEstError.cpp | 2013-09-21 02:53 | 17K | ||
analysisEstError.h | 2013-09-21 02:53 | 1.3K | ||
analysisEstLikes.cpp | 2013-09-21 02:53 | 13K | ||
analysisFunction.cpp | 2013-09-21 02:53 | 13K | ||
analysisFunction.h | 2013-09-21 02:53 | 2.0K | ||
analysisHWE.cpp | 2013-09-21 02:53 | 7.6K | ||
analysisKeepList.cpp | 2013-09-21 02:53 | 10K | ||
analysisKeepList.h | 2013-09-21 02:53 | 756 | ||
analysisMaf.beforeF.h | 2013-09-21 02:53 | 1.5K | ||
analysisMaf.cpp | 2013-09-21 02:53 | 26K | ||
analysisMaf.h | 2013-09-21 02:53 | 1.6K | ||
analysisMaf.inbreed.cpp | 2013-09-21 02:53 | 25K | ||
analysisMajorMinor.cpp | 2013-09-21 02:53 | 8.0K | ||
angsd.cpp | 2013-09-21 02:53 | 14K | ||
angsd_realSFS.cpp | 2013-09-21 02:53 | 36K | ||
angsd_realSFS2.cpp | 2013-09-21 02:53 | 34K | ||
argStruct.h | 2013-09-21 02:53 | 458 | ||
bam_likes.cpp | 2013-09-21 02:53 | 8.3K | ||
bam_likes.h | 2013-09-21 02:53 | 117 | ||
bambi_interface.h | 2013-09-21 02:53 | 1.0K | ||
bammer_main.cpp | 2013-09-21 02:53 | 12K | ||
bammer_main.h | 2013-09-21 02:53 | 29 | ||
bams.cpp | 2013-09-21 02:53 | 11K | ||
bams.h | 2013-09-21 02:53 | 5.3K | ||
baq_adjustMapQ.cpp | 2013-09-21 02:53 | 8.1K | ||
baq_adjustMapQ.h | 2013-09-21 02:53 | 110 | ||
beagleReader.cpp | 2013-09-21 02:53 | 4.4K | ||
beagleReader.h | 2013-09-21 02:53 | 376 | ||
bfgs.cpp | 2013-09-21 02:53 | 185K | ||
bfgs.h | 2013-09-21 02:53 | 2.2K | ||
bgzf.c | 2013-09-21 02:53 | 19K | ||
bgzf.h | 2013-09-21 02:53 | 4.5K | ||
deprecated/ | 2013-09-21 02:53 | - | ||
faidx.c | 2013-09-21 02:53 | 11K | ||
faidx.h | 2013-09-21 02:53 | 3.1K | ||
fet.c | 2013-09-21 02:53 | 3.1K | ||
filterStrandBias.cpp | 2013-09-21 02:53 | 736 | ||
gatk_likes.cpp | 2013-09-21 02:53 | 1.9K | ||
gatk_likes.h | 2013-09-21 02:53 | 105 | ||
general.cpp | 2013-09-21 02:53 | 2.2K | ||
general.h | 2013-09-21 02:53 | 569 | ||
getFasta.cpp | 2013-09-21 02:53 | 4.5K | ||
getFasta.h | 2013-09-21 02:53 | 1.2K | ||
hetplas.cpp | 2013-09-21 02:53 | 11K | ||
hetplas2.cpp | 2013-09-21 02:53 | 3.0K | ||
indexer.cpp | 2013-09-21 02:53 | 9.7K | ||
indexer.h | 2013-09-21 02:53 | 254 | ||
keepToBin.cpp | 2013-09-21 02:53 | 75 | ||
khash.h | 2013-09-21 02:53 | 17K | ||
knetfile.c | 2013-09-21 02:53 | 18K | ||
knetfile.h | 2013-09-21 02:53 | 1.6K | ||
kprobaln.c | 2013-09-21 02:53 | 10K | ||
kprobaln.h | 2013-09-21 02:53 | 1.5K | ||
ksort.h | 2013-09-21 02:53 | 9.8K | ||
kstring.c | 2013-09-21 02:53 | 5.3K | ||
kstring.h | 2013-09-21 02:53 | 2.6K | ||
mUpPile.cpp | 2013-09-21 02:53 | 46K | ||
mUpPile.h | 2013-09-21 02:53 | 784 | ||
misc/ | 2013-09-21 02:53 | - | ||
mrStruct.h | 2013-09-21 02:53 | 714 | ||
multiReader.cpp | 2013-09-21 02:53 | 5.3K | ||
multiReader.h | 2013-09-21 02:53 | 698 | ||
parseArgs_bambi.cpp | 2013-09-21 02:53 | 4.3K | ||
parseArgs_bambi.h | 2013-09-21 02:53 | 575 | ||
pileup.cpp | 2013-09-21 02:53 | 12K | ||
pileup.h | 2013-09-21 02:53 | 2.9K | ||
pileups.cpp | 2013-09-21 02:53 | 7.1K | ||
pileups.h | 2013-09-21 02:53 | 1.1K | ||
printRes.cpp | 2013-09-21 02:53 | 2.2K | ||
printRes.h | 2013-09-21 02:53 | 716 | ||
razf.c | 2013-09-21 02:53 | 24K | ||
razf.h | 2013-09-21 02:53 | 4.0K | ||
razip.c | 2013-09-21 02:53 | 4.0K | ||
reader_sim.cpp | 2013-09-21 02:53 | 2.9K | ||
reader_sim.cpp.old | 2013-09-21 02:53 | 2.2K | ||
reader_sim.h | 2013-09-21 02:53 | 506 | ||
reader_sim.h.old | 2013-09-21 02:53 | 398 | ||
shared.cpp | 2013-09-21 02:53 | 15K | ||
shared.h | 2013-09-21 02:53 | 2.0K | ||
snpStat.cpp | 2013-09-21 02:53 | 2.2K | ||
snptools.cpp | 2013-09-21 02:53 | 1.3K | ||
soapMaster.cpp | 2013-09-21 02:53 | 10K | ||
soapMaster.h | 2013-09-21 02:53 | 577 | ||
soapReader.cpp | 2013-09-21 02:53 | 11K | ||
soapReader.h | 2013-09-21 02:53 | 2.3K | ||
soap_likes.cpp | 2013-09-21 02:53 | 14K | ||
soap_likes.h | 2013-09-21 02:53 | 661 | ||
tglfs.cpp | 2013-09-21 02:53 | 3.9K | ||
tglfs.h | 2013-09-21 02:53 | 1.0K | ||
thorfinn.cpp | 2013-09-21 02:53 | 2.8K | ||
thorfinn.h | 2013-09-21 02:53 | 455 | ||
threadpool2.cpp | 2013-09-21 02:53 | 9.9K | ||
threadpool2b.cpp | 2013-09-21 02:53 | 9.6K | ||
threadpool3.cpp | 2013-09-21 02:53 | 10K | ||