ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
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Showing below up to 50 results in range #1 to #50.
- 2d SFS Estimation
- ANGSD
- Abbababa
- Abbababa2
- Allele Counts
- Allele Frequencies
- Angsd structure
- Association
- Authors
- Base quality
- Beagle input
- Bugs
- Change log
- Changes
- Citing angsd
- Contamination
- Covariance matrix for PCA
- Depth
- Direct Ancestry
- DistAngsd
- ErrorPerfect
- ErrorSykMethod
- Error estimation
- Error estimation method
- Example of a covariance file
- Example of a covariate file
- Example of a quantitative phenotype file
- Example of cases control phenotype file
- Fasta
- Filters
- Fst
- Fst PCA
- Fst correctness
- Gatk
- Genotype Distribution
- Genotype Likelihoods
- Genotype calling
- Genotype likelihoods from alignments new
- Glcomparison
- Glf files
- HWE and Inbreeding estimates
- HWE test
- Haploid calling
- Heterozygosity
- Inbreed
- Input
- Installation
- Introduction
- Kim2011
- Korneliussen2013